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Biology-based brain model matches animals in learning, enables new discovery

A new computational model of the brain based closely on its biology and physiology not only learned a simple visual category learning task exactly as well as lab animals, but even enabled the discovery of counterintuitive activity by a group of neurons that researchers working with animals to perform the same task had not noticed in their data before, says a team of scientists at Dartmouth College, MIT, and the State University of New York at Stony Brook.

Notably, the model produced these achievements without ever being trained on any data from animal experiments. Instead, it was built from scratch to faithfully represent how neurons connect into circuits and then communicate electrically and chemically across broader brain regions to produce cognition and behavior. Then, when the research team asked the model to perform the same task that they had previously performed with the animals (looking at patterns of dots and deciding which of two broader categories they fit), it produced highly similar neural activity and behavioral results, acquiring the skill with almost exactly the same erratic progress.

“It’s just producing new simulated plots of brain activity that then only afterward are being compared to the lab animals. The fact that they match up as strikingly as they do is kind of shocking,” says Richard Granger, a professor of psychological and brain sciences at Dartmouth and senior author of a new study in Nature Communications that describes the model.

Neutrophil extracellular trapping network-associated biomarkers in liver fibrosis: machine learning and experimental validation

The diagnostic and therapeutic potential of neutrophil extracellular traps (NETs) in liver fibrosis (LF) has not been fully explored. We aim to screen and verify NETs-related liver fibrosis biomarkers through machine learning.

In order to obtain NETs-related differentially expressed genes (NETs-DEGs), differential analysis and WGCNA analysis were performed on the GEO dataset (GSE84044, GSE49541) and the NETs dataset. Enrichment analysis and protein interaction analysis were used to reveal the candidate genes and potential mechanisms of NETs-related liver fibrosis. Biomarkers were screened using SVM-RFE and Boruta machine learning algorithms, followed by immune infiltration analysis. A multi-stage model of fibrosis in mice was constructed, and neutrophil infiltration, NETs accumulation and NETs-related biomarkers were characterized by immunohistochemistry, immunofluorescence, flow cytometry and qPCR. Finally, the molecular regulatory network and potential drugs of biomarkers were predicted.

A total of 166 NETs-DEGs were identified. Through enrichment analysis, these genes were mainly enriched in chemokine signaling pathway and cytokine-cytokine receptor interaction pathway. Machine learning screened CCL2 as a NETs-related liver fibrosis biomarker, involved in ribosome-related processes, cell cycle regulation and allograft rejection pathways. Immune infiltration analysis showed that there were significant differences in 22 immune cell subtypes between fibrotic samples and healthy samples, including neutrophils mainly related to NETs production. The results of in vivo experiments showed that neutrophil infiltration, NETs accumulation and CCL2 level were up-regulated during fibrosis. A total of 5 miRNAs, 2 lncRNAs, 20 function-related genes and 6 potential drugs were identified based on CCL2.

Eco-Friendly Agrochemicals: Embracing Green Nanotechnology

In the pursuit of sustainable agricultural practices, researchers are increasingly turning to innovative approaches that blend technology and environmental consciousness. A recent study led by M.R. Salvadori, published in Discover Agriculture, delves into the promising world of green nanotechnology in agrochemicals. This research investigates how nanoscale materials can enhance the effectiveness of agrochemicals while minimizing their environmental footprint. The findings suggest that this novel approach may revolutionize crop protection and nutrient delivery systems.

Nanotechnology involves manipulating materials at the nanoscale, typically between 1 and 100 nanometers. At this scale, materials exhibit unique properties that differ significantly from their bulk counterparts. These properties can be harnessed to improve the delivery and efficacy of agrochemicals. For instance, nanosized fertilizers can increase the availability of nutrients to plants, enhancing growth and reducing waste. This targeted approach is essential in combating soil nutrient depletion and ensuring food security in an era of burgeoning global population.

Traditional agrochemicals often come with the burden of negative environmental impacts, including soil and water contamination. The introduction of green nanotechnology aims to address these concerns by developing more biodegradable and environmentally friendly agrochemicals. By using nanomaterials derived from natural sources, researchers hope to create a symbiotic relationship between agricultural practices and ecological health. This paradigm shift could pave the way for a new era of environmentally responsible farming.

Greener method recovers critical metals from spent batteries

Researchers have developed a breakthrough method to recover high-purity nickel, cobalt, manganese and lithium from spent lithium-ion batteries using a mild, sustainable solvent.

The process, detailed in the journal Sustainable Materials and Technologies, offers a safer and more environmentally friendly alternative to traditional high-temperature or chemical-intensive recycling methods.

Globally, around 500,000 metric tons of spent lithium-ion batteries (LIBs) have already accumulated, and about 10% of spent batteries are fully recycled in Australia.

A novel mechanism for cancer-associated weight loss

Combined metabolomics and transcriptomics analysis in eight different organs of tumor-bearing mice with and without cachexia allowed researchers to create metabolic signatures typical of cancer-associated weight loss. High-throughput analyses identified a cachexia-specific metabolic and genetic signature that provides insight into the progression of these metabolic changes.

The researchers found that all organs showed increased activation of the so-called “one carbon cycle”, a biochemical process essential for the synthesis of nucleotides, amino acids, and cell regeneration. Products of this cycle, such as sarcosine or dimethylglycine, could potentially serve as biomarkers for cachexia in the future.

The study also revealed that hyperactivation of the one carbon cycle in muscle is associated with increased glucose metabolism (glucose hypermetabolism) and muscle atrophy. Early experiments suggest that inhibiting this process could prevent muscle loss. Comparative analyses across eight different mouse tumor models (lung, colon, and pancreatic cancer) confirmed that the one carbon signature represents a universal cachexia signature, independent of cancer type.

Currently, there is no approved drug for cancer cachexia in Germany. New approaches are being explored to address cancer-related appetite loss. This study provides the first evidence of how metabolism itself could potentially be normalized. Early experiments in cell cultures show that interventions targeting the one carbon cycle can have positive effects. sciencenewshighlights ScienceMission.


Cachexia is a metabolic disorder that causes uncontrolled weight loss and muscle wasting in chronic diseases and cancer. A new study shows that cachexia affects more than just muscles. Numerous organs respond in a coordinated manner, ultimately contributing to muscle loss. Analysis of metabolome and transcriptome data, along with glucose tracing in tumor-bearing mouse models, identified a novel mechanism that plays a key role in cancer-associated weight loss.

A loss of 10% of body weight within six months – what may sound desirable in some contexts – often causes uncertainty and frustration in cancer patients with cachexia, as they are unable to maintain or gain body weight despite wanting to. Cachexia (from the Greek kakós, “bad,” and héxis, “condition”) affects 50–80% of all cancer patients, reduces quality of life, diminishes the effectiveness of cancer therapies, and increases mortality.

Scalable ion concentration polarization dialyzer for peritoneal dialysate regeneration

Year 2025 portable dialysis machine.


Where (C: molar concentration, R: ideal gas constant, T: absolute temperature).

While ED uses both cation and anion exchange membranes to remove charged components, it cannot purify neutral species because they are not affected by the electric field (Fig. 1 A). Therefore, its application as a dialyzer is limited by its inability to simultaneously remove neutral urea and positively charged creatinine. Despite their merits, none of these techniques can simultaneously purify a wide size-range of target species, spanning from salt ions to biomolecular contaminants, in a single-step process. In contrast, one of the nanoelectrokinetic phenomenon, the ion concentration polarization (ICP) based purification technology [28,29,30,31,32], as reported recently, aligns with these criteria, owing to its distinctive electrical filtration capabilities and scalability. Briefly, the perm-selectivity of nanoporous membranes initiates an electrolyte concentration polarization on both sides of the membrane. In the case of cation-selective membranes, an ion depletion zone forms on the anodic side of the membrane [33, 34]. Charged species reroute their trajectories along the concentration gradients near this ion depletion zone, serving as a pivotal site for the purification of a broad range of contaminants.

In this study, for portable PD, we firstly proposed a scalable ICP dialysate regeneration device. ICP removes cationic components through the cation exchange membrane, anionic components by electrostatic repulsion and neutral species through an electrochemical reaction at the electrode (Fig. 1B). When urea, a neutrally charged body toxin, begins to undergo direct oxidation at the electrode inlet, the concentration of urea around the electrode decreases. The urea concentration profile exhibits a decrease closer to the electrode, and as urea diffuses towards the electrode vicinity, a chain reaction of direct oxidation occurs. As a result, a purified dialysate could be continuously obtained by extracting a stream from the ion depletion zone. Micro-nanofluidic dialysate regeneration platform was upscaled in two-and three-dimensional directions using a commercial 3D printer as shown in Fig. 1C.

The art of custom-intercalating 42 metals into layered titanates

A research team affiliated with UNIST has reported a novel synthesis strategy that enables the direct intercalation of a wide range of metal cations into the interlayer spaces of layered titanate (LT) structures. This approach opens new possibilities for designing highly tailored catalysts and energy storage materials for specific industrial applications.

Professors Seungho Cho (Department of Materials Science and Engineering), Kwangjin An (School of Energy and Chemical Engineering), and Hu Young Jeong (Graduate School of Semiconductor Materials and Devices Engineering) at UNIST, in collaboration with Professor Jeong Woo Han from Seoul National University, report this advancement in Advanced Materials.

Silicon Is Coming to Smartphone Batteries for a Big Energy Boost

A novel lithium-ion battery that uses silicon in its anodes may have the highest energy density of any battery currently commercially available. Its manufacturer, Enovix, says it has shipped the new battery to a leading smartphone company for a debut in mobile phones later this year.

Many of the lithium-ion batteries that power everything from mobile devices to electric cars use graphite in their anodes. However, for decades, researchers have investigated silicon as a replacement for this graphite. In theory, silicon offers roughly 10 times the energy density of graphite in lithium-ion batteries.

“Basically, graphite holds on to lithium using holes in its structure,” says Raj Talluri, CEO of Enovix. “In contrast, with silicon in the anodes—usually a silicon oxide or a silicon carbide—lithium actually chemically combines with the silicon to form a new material. This lets a silicon-based anode hold on to much more lithium than graphite during charging. When the battery discharges, the silicon material goes back to its original state.”

Abstract: Helping alveolar macrophages live to fight another day during viral #pneumonia:

Joseph P. Mizgerd & team provide a Commentary on Christina Malainou et al.: https://doi.org/10.1172/JCI185390


2Department of Virology, Immunology, and Microbiology.

3Department of Medicine, and.

4Department of Biochemistry and Cell Biology, Boston University Chobanian and Avedisian School of Medicine, Boston, Massachusetts, USA.

A viable therapeutic target pancreatic ductal adenocarcinoma

This issue’s cover features work by Adrian M. Seifert & team on Nectin-4’s connection to poor outcome and immune suppression in patients with PDAC, and targeting Nectin-4 with the antibody-drug conjugate enfortumab vedotin inhibited tumor growth in PDAC organoids:

The cover image shows high Nectin-4 immunohistochemistry staining (brown) in human PDAC.


1Department of Visceral, Thoracic and Vascular Surgery, University Hospital Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.

2National Center for Tumor Diseases (NCT), Dresden, Germany.

3German Cancer Research Center (DKFZ), Heidelberg, Germany.

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